Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
VclQ64727 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VclQ64727 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VclQ64727 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VclQ64727 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
VclQ64727 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
VclQ64727 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.45□□□□□ -0.26
VclQ64727 Gm18018-201ENSMUST00000198273 408 ntBASIC13.45□□□□□ -0.26
VclQ64727 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.45□□□□□ -0.26
VclQ64727 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.45□□□□□ -0.26
VclQ64727 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VclQ64727 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VclQ64727 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.45□□□□□ -0.26
VclQ64727 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.45□□□□□ -0.26
VclQ64727 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VclQ64727 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
VclQ64727 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.44□□□□□ -0.26
VclQ64727 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.44□□□□□ -0.26
VclQ64727 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.44□□□□□ -0.26
VclQ64727 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Mir6392-201ENSMUST00000184924 108 ntBASIC13.44□□□□□ -0.26
VclQ64727 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.44□□□□□ -0.26
VclQ64727 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
VclQ64727 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Gm18624-201ENSMUST00000220966 658 ntBASIC13.44□□□□□ -0.26
VclQ64727 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
VclQ64727 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.44□□□□□ -0.26
VclQ64727 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VclQ64727 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
VclQ64727 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
VclQ64727 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.43□□□□□ -0.26
VclQ64727 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
VclQ64727 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VclQ64727 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
VclQ64727 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
VclQ64727 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.43□□□□□ -0.26
VclQ64727 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.43□□□□□ -0.26
VclQ64727 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.43□□□□□ -0.26
VclQ64727 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.43□□□□□ -0.26
VclQ64727 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms