Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim27Q62158 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim27Q62158 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim27Q62158 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Trim27Q62158 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim27Q62158 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim27Q62158 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Trim27Q62158 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Gm44855-201ENSMUST00000205725 362 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Gm19078-201ENSMUST00000206311 727 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Gm24447-201ENSMUST00000083977 338 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim27Q62158 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim27Q62158 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.77■□□□□ 0.28
Trim27Q62158 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim27Q62158 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim27Q62158 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim27Q62158 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim27Q62158 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim27Q62158 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.76■□□□□ 0.27
Trim27Q62158 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim27Q62158 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.76■□□□□ 0.27
Trim27Q62158 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.76■□□□□ 0.27
Trim27Q62158 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm17330-201ENSMUST00000221047 165 ntBASIC16.76■□□□□ 0.27
Trim27Q62158 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim27Q62158 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim27Q62158 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.76■□□□□ 0.27
Trim27Q62158 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim27Q62158 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.75■□□□□ 0.27
Trim27Q62158 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm12485-201ENSMUST00000119641 291 ntBASIC16.75■□□□□ 0.27
Trim27Q62158 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim27Q62158 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.75■□□□□ 0.27
Trim27Q62158 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Trim27Q62158 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Trim27Q62158 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.75■□□□□ 0.27
Trim27Q62158 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim27Q62158 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim27Q62158 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim27Q62158 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim27Q62158 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.74■□□□□ 0.27
Trim27Q62158 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms