Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rai1Q61818 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rai1Q61818 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rai1Q61818 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rai1Q61818 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.01□□□□□ -0.33
Rai1Q61818 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rai1Q61818 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rai1Q61818 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rai1Q61818 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rai1Q61818 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.01□□□□□ -0.33
Rai1Q61818 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rai1Q61818 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13□□□□□ -0.33
Rai1Q61818 Gm7118-201ENSMUST00000200167 1003 ntBASIC13□□□□□ -0.33
Rai1Q61818 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13□□□□□ -0.33
Rai1Q61818 Gm6082-201ENSMUST00000215204 454 ntBASIC13□□□□□ -0.33
Rai1Q61818 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13□□□□□ -0.33
Rai1Q61818 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13□□□□□ -0.33
Rai1Q61818 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Gm42872-201ENSMUST00000200026 1967 ntBASIC13□□□□□ -0.33
Rai1Q61818 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13□□□□□ -0.33
Rai1Q61818 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rai1Q61818 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rai1Q61818 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Rai1Q61818 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rai1Q61818 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.99□□□□□ -0.33
Rai1Q61818 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Mir3547-201ENSMUST00000175461 88 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm6458-201ENSMUST00000211573 635 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rai1Q61818 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm2231-201ENSMUST00000125661 612 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm10608-202ENSMUST00000213924 676 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.99□□□□□ -0.33
Rai1Q61818 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.99□□□□□ -0.33
Rai1Q61818 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rai1Q61818 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rai1Q61818 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rai1Q61818 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms