Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm28423-201ENSMUST00000190701 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21899-201ENSMUST00000190745 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21910-201ENSMUST00000191163 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21849-201ENSMUST00000191571 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm28678-201ENSMUST00000191593 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm20910-201ENSMUST00000193268 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21871-201ENSMUST00000194621 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm44492-201ENSMUST00000197012 141 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sox17Q61473 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.8□□□□□ -0.36
Sox17Q61473 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.8□□□□□ -0.36
Sox17Q61473 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm29741-201ENSMUST00000192667 421 ntBASIC12.8□□□□□ -0.36
Sox17Q61473 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.8□□□□□ -0.36
Sox17Q61473 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.8□□□□□ -0.36
Sox17Q61473 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sox17Q61473 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.8□□□□□ -0.36
Sox17Q61473 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox17Q61473 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.79□□□□□ -0.36
Sox17Q61473 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.79□□□□□ -0.36
Sox17Q61473 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox17Q61473 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms