Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.19□□□□□ -0.3
Col12a1Q60847 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col12a1Q60847 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Col12a1Q60847 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col12a1Q60847 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm9062-201ENSMUST00000117712 727 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm20392-201ENSMUST00000173047 701 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm27046-201ENSMUST00000182160 463 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm37666-201ENSMUST00000194110 866 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm43916-201ENSMUST00000205062 967 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm17391-201ENSMUST00000171036 126 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.18□□□□□ -0.3
Col12a1Q60847 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.18□□□□□ -0.3
Col12a1Q60847 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.18□□□□□ -0.3
Col12a1Q60847 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col12a1Q60847 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm8913-201ENSMUST00000209491 641 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm12165-201ENSMUST00000117047 342 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm12795-201ENSMUST00000117594 539 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Gm45433-201ENSMUST00000209386 247 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.17□□□□□ -0.3
Col12a1Q60847 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col12a1Q60847 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.17□□□□□ -0.3
Col12a1Q60847 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms