Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.14□□□□□ -0.31
ClpbQ60649 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ClpbQ60649 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ClpbQ60649 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Gm4804-201ENSMUST00000182234 999 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Gm21470-201ENSMUST00000187680 696 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.13□□□□□ -0.31
ClpbQ60649 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Gm5425-201ENSMUST00000214125 459 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.13□□□□□ -0.31
ClpbQ60649 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClpbQ60649 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.13□□□□□ -0.31
ClpbQ60649 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.12□□□□□ -0.31
ClpbQ60649 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
ClpbQ60649 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ClpbQ60649 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.12□□□□□ -0.31
ClpbQ60649 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.12□□□□□ -0.31
ClpbQ60649 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.12□□□□□ -0.31
ClpbQ60649 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
ClpbQ60649 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ClpbQ60649 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm2445-201ENSMUST00000182798 989 ntBASIC13.11□□□□□ -0.31
ClpbQ60649 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ClpbQ60649 Gm18027-201ENSMUST00000218947 619 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms