Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm11452-201ENSMUST00000122376 690 ntBASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 AA619741-201ENSMUST00000195095 646 ntBASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm6973-201ENSMUST00000117080 721 ntBASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav15-1-dv6-1Q5R1D2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms