Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gm27622-201ENSMUST00000183779 60 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gm17837-201ENSMUST00000186435 985 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Mir497b-201ENSMUST00000093601 125 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Scn2bQ56A07 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.53□□□□□ -0.24
Scn2bQ56A07 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn2bQ56A07 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn2bQ56A07 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Scn2bQ56A07 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm25144-201ENSMUST00000179561 110 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm25352-201ENSMUST00000179815 110 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm16476-201ENSMUST00000221544 139 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Dupd1-202ENSMUST00000224735 548 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.52□□□□□ -0.25
Scn2bQ56A07 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn2bQ56A07 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn2bQ56A07 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms