Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm12502-201ENSMUST00000120197 444 ntBASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm15547-201ENSMUST00000122152 333 ntBASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.59■□□□□ 0.25
Shank3Q4ACU6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shank3Q4ACU6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Shank3Q4ACU6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Shank3Q4ACU6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm42997-202ENSMUST00000200321 985 ntBASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Shank3Q4ACU6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Mir1943-201ENSMUST00000158276 73 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm6407-201ENSMUST00000176468 549 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm27023-201ENSMUST00000182372 285 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm3096-201ENSMUST00000185770 364 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm9555-201ENSMUST00000200908 583 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm45770-201ENSMUST00000212105 616 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gm22058-201ENSMUST00000083393 310 ntBASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Shank3Q4ACU6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.56■□□□□ 0.24
Shank3Q4ACU6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shank3Q4ACU6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms