Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ckap2Q3V1H1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ckap2Q3V1H1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Ckap2Q3V1H1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ckap2Q3V1H1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Gm15678-201ENSMUST00000117573 960 ntBASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ckap2Q3V1H1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms