Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Znf48Q3US17 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Znf48Q3US17 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Gm13183-201ENSMUST00000118615 789 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.41□□□□□ -0.58
Znf48Q3US17 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Gm9719-201ENSMUST00000162765 543 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Gm18018-201ENSMUST00000198273 408 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.41□□□□□ -0.58
Znf48Q3US17 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Gm20445-201ENSMUST00000061905 565 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Znf48Q3US17 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.41□□□□□ -0.58
Znf48Q3US17 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Znf48Q3US17 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Znf48Q3US17 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Znf48Q3US17 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.4□□□□□ -0.58
Znf48Q3US17 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm15824-201ENSMUST00000119516 955 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm17917-201ENSMUST00000218561 953 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm9899-201ENSMUST00000065519 555 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.4□□□□□ -0.58
Znf48Q3US17 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Znf48Q3US17 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Znf48Q3US17 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Znf48Q3US17 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Znf48Q3US17 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.4□□□□□ -0.59
Znf48Q3US17 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Znf48Q3US17 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Znf48Q3US17 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Znf48Q3US17 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Znf48Q3US17 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Znf48Q3US17 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Znf48Q3US17 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Znf48Q3US17 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Znf48Q3US17 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.39□□□□□ -0.59
Znf48Q3US17 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Znf48Q3US17 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms