Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.79□□□□□ -0.84
Cks1brtQ3UNC9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gm7506-201ENSMUST00000207758 815 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gm9182-201ENSMUST00000217829 639 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Cks1brtQ3UNC9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cks1brtQ3UNC9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm15165-201ENSMUST00000118140 502 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm6944-201ENSMUST00000182449 1006 ntBASIC9.77□□□□□ -0.85
Cks1brtQ3UNC9 Gm2451-201ENSMUST00000199447 999 ntBASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms