Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gm44069-201ENSMUST00000204898 506 ntBASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sf3b2Q3UJB0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm15276-201ENSMUST00000145953 498 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm38317-201ENSMUST00000195564 343 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm4768-201ENSMUST00000206199 686 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sf3b2Q3UJB0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gm12363-201ENSMUST00000122250 668 ntBASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gm13570-201ENSMUST00000140763 309 ntBASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sf3b2Q3UJB0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm11637-201ENSMUST00000120601 592 ntBASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm13316-201ENSMUST00000140537 691 ntBASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.53■□□□□ 0.4
Sf3b2Q3UJB0 Gm27438-201ENSMUST00000183480 110 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms