Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rnf44Q3UHJ8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf44Q3UHJ8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf44Q3UHJ8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms