Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Brf2Q3UAW9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Gm13223-201ENSMUST00000118609 747 ntBASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Brf2Q3UAW9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gm6912-201ENSMUST00000117218 544 ntBASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Brf2Q3UAW9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Brf2Q3UAW9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms