Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Tmem88bQ3TYP4 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.39□□□□□ -0.59
Tmem88bQ3TYP4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gm16570-201ENSMUST00000161951 436 ntBASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gm19184-201ENSMUST00000196798 928 ntBASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.38□□□□□ -0.59
Tmem88bQ3TYP4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm23931-201ENSMUST00000103842 109 ntBASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm16177-201ENSMUST00000120728 718 ntBASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm42627-201ENSMUST00000197347 224 ntBASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm44364-201ENSMUST00000198368 141 ntBASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm42550-201ENSMUST00000201553 960 ntBASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tmem88bQ3TYP4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem88bQ3TYP4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem88bQ3TYP4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem88bQ3TYP4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem88bQ3TYP4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tmem88bQ3TYP4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms