Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Khdc4Q3TCX3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Khdc4Q3TCX3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Khdc4Q3TCX3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Khdc4Q3TCX3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Khdc4Q3TCX3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Khdc4Q3TCX3 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm15806-201ENSMUST00000120696 955 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm12882-201ENSMUST00000121696 517 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm5354-201ENSMUST00000182417 973 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Khdc4Q3TCX3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Gm13829-201ENSMUST00000119600 138 ntBASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Gm12341-201ENSMUST00000119724 503 ntBASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Khdc4Q3TCX3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Khdc4Q3TCX3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms