Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm25406-201ENSMUST00000157599 105 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm9726-201ENSMUST00000180321 678 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm7977-201ENSMUST00000193787 748 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.22□□□□□ -0.61
Trim63Q38HM4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm37179-201ENSMUST00000194862 823 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Trmt13-210ENSMUST00000198454 880 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Timm23-208ENSMUST00000226683 750 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm10566-201ENSMUST00000086739 996 ntBASIC11.21□□□□□ -0.61
Trim63Q38HM4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim63Q38HM4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.21□□□□□ -0.62
Trim63Q38HM4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim63Q38HM4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.2□□□□□ -0.62
Trim63Q38HM4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.2□□□□□ -0.62
Trim63Q38HM4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Gm20049-201ENSMUST00000219950 730 ntBASIC11.2□□□□□ -0.62
Trim63Q38HM4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.2□□□□□ -0.62
Trim63Q38HM4 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms