Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm13296-201ENSMUST00000117854 997 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Defa-ps17-201ENSMUST00000121849 171 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm22877-201ENSMUST00000175451 105 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm9136-201ENSMUST00000193368 454 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm7904-201ENSMUST00000217049 465 ntBASIC12.1□□□□□ -0.47
Chd8Q09XV5 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm23251-201ENSMUST00000103773 110 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm12015-201ENSMUST00000117065 843 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm13286-201ENSMUST00000117750 537 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm12363-201ENSMUST00000122250 668 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm27046-201ENSMUST00000182160 463 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 Rprl1-202ENSMUST00000198476 238 ntBASIC12.09□□□□□ -0.47
Chd8Q09XV5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chd8Q09XV5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Chd8Q09XV5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chd8Q09XV5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chd8Q09XV5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Chd8Q09XV5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Chd8Q09XV5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms