Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 Gm14314-201ENSMUST00000118225 1015 ntBASIC20.5■□□□□ 0.87
Col17a1Q07563 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC20.5■□□□□ 0.87
Col17a1Q07563 Gm44772-201ENSMUST00000207623 1191 ntBASIC20.5■□□□□ 0.87
Col17a1Q07563 Gm35713-201ENSMUST00000210516 199 ntBASIC20.5■□□□□ 0.87
Col17a1Q07563 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col17a1Q07563 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Gm38157-201ENSMUST00000194178 1698 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Gm13812-201ENSMUST00000118061 1347 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Gm13810-201ENSMUST00000118584 1347 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Gm37201-201ENSMUST00000191845 523 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 AC131690.1-201ENSMUST00000218406 374 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC20.49■□□□□ 0.87
Col17a1Q07563 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC20.49■□□□□ 0.87
Col17a1Q07563 Mirlet7i-201ENSMUST00000083472 85 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col17a1Q07563 AC166574.4-201ENSMUST00000227165 1937 ntBASIC20.49■□□□□ 0.87
Col17a1Q07563 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Col17a1Q07563 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm22442-201ENSMUST00000157256 144 ntBASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm42511-201ENSMUST00000196160 234 ntBASIC20.48■□□□□ 0.87
Col17a1Q07563 Gm5298-201ENSMUST00000201122 892 ntBASIC20.48■□□□□ 0.87
Col17a1Q07563 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col17a1Q07563 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col17a1Q07563 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Gm38355-201ENSMUST00000192514 1570 ntBASIC20.47■□□□□ 0.87
Col17a1Q07563 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Gm13736-201ENSMUST00000119272 253 ntBASIC20.47■□□□□ 0.87
Col17a1Q07563 Gm11979-201ENSMUST00000119629 743 ntBASIC20.47■□□□□ 0.87
Col17a1Q07563 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col17a1Q07563 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col17a1Q07563 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Col17a1Q07563 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Gm14832-201ENSMUST00000121289 322 ntBASIC20.46■□□□□ 0.87
Col17a1Q07563 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col17a1Q07563 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC20.46■□□□□ 0.87
Col17a1Q07563 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms