Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Gm15770-201ENSMUST00000117498 584 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox4Q06831 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Gm9794-201ENSMUST00000202370 423 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Sox4Q06831 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.43□□□□□ -0.26
Sox4Q06831 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox4Q06831 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sox4Q06831 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox4Q06831 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.42□□□□□ -0.26
Sox4Q06831 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Gm15678-201ENSMUST00000117573 960 ntBASIC13.42□□□□□ -0.26
Sox4Q06831 Mir7654-201ENSMUST00000185082 70 ntBASIC13.42□□□□□ -0.26
Sox4Q06831 Gm44719-201ENSMUST00000206404 149 ntBASIC13.42□□□□□ -0.26
Sox4Q06831 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.42□□□□□ -0.26
Sox4Q06831 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.42□□□□□ -0.26
Sox4Q06831 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox4Q06831 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Sox4Q06831 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Sox4Q06831 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox4Q06831 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox4Q06831 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox4Q06831 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox4Q06831 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Sox4Q06831 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.41□□□□□ -0.26
Sox4Q06831 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox4Q06831 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox4Q06831 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sox4Q06831 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.41□□□□□ -0.26
Sox4Q06831 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Gm12490-201ENSMUST00000120255 560 ntBASIC13.41□□□□□ -0.26
Sox4Q06831 Gm11424-201ENSMUST00000121929 829 ntBASIC13.41□□□□□ -0.26
Sox4Q06831 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox4Q06831 Gm12138-201ENSMUST00000122180 951 ntBASIC13.41□□□□□ -0.26
Sox4Q06831 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox4Q06831 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox4Q06831 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms