Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm11531-201ENSMUST00000117614 555 ntBASIC9.79□□□□□ -0.84
Hspg2Q05793 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 AC131690.1-201ENSMUST00000218406 374 ntBASIC9.79□□□□□ -0.84
Hspg2Q05793 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.79□□□□□ -0.84
Hspg2Q05793 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm12029-201ENSMUST00000120073 832 ntBASIC9.79□□□□□ -0.84
Hspg2Q05793 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.79□□□□□ -0.84
Hspg2Q05793 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.79□□□□□ -0.84
Hspg2Q05793 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.79□□□□□ -0.84
Hspg2Q05793 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Hspg2Q05793 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.78□□□□□ -0.84
Hspg2Q05793 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm37305-201ENSMUST00000195714 4279 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm28450-201ENSMUST00000187349 638 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm5781-201ENSMUST00000219792 443 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Hspg2Q05793 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
Hspg2Q05793 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.78□□□□□ -0.84
Hspg2Q05793 Gm17330-201ENSMUST00000221047 165 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.78□□□□□ -0.84
Hspg2Q05793 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Hspg2Q05793 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms