Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm11801-201ENSMUST00000117807 746 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm5687-201ENSMUST00000118252 640 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm15957-201ENSMUST00000118893 974 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.43□□□□□ -0.26
Col9a1Q05722 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm14460-201ENSMUST00000121511 639 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col9a1Q05722 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm37576-201ENSMUST00000194228 372 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 CT030194.1-201ENSMUST00000225507 532 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Ntng1-201ENSMUST00000051253 327 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.43□□□□□ -0.26
Col9a1Q05722 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 AC140393.3-201ENSMUST00000228396 1352 ntBASIC13.43□□□□□ -0.26
Col9a1Q05722 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col9a1Q05722 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col9a1Q05722 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm10434-201ENSMUST00000101158 471 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm13600-201ENSMUST00000117949 744 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm7541-201ENSMUST00000118361 535 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.42□□□□□ -0.26
Col9a1Q05722 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm25072-201ENSMUST00000175233 235 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm3890-201ENSMUST00000182416 207 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm6867-201ENSMUST00000219165 425 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.42□□□□□ -0.26
Col9a1Q05722 CT572999.1-201ENSMUST00000220315 1260 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.42□□□□□ -0.26
Col9a1Q05722 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col9a1Q05722 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col9a1Q05722 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Col9a1Q05722 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col9a1Q05722 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.41□□□□□ -0.26
Col9a1Q05722 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col9a1Q05722 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms