Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.89□□□□□ -0.19
Gabpb1Q00420 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.89□□□□□ -0.19
Gabpb1Q00420 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Gabpb1Q00420 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.88□□□□□ -0.19
Gabpb1Q00420 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Gabpb1Q00420 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.87□□□□□ -0.19
Gabpb1Q00420 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm15770-201ENSMUST00000117498 584 ntBASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.87□□□□□ -0.19
Gabpb1Q00420 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gabpb1Q00420 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gabpb1Q00420 Auts2-212ENSMUST00000178555 309 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms