Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm6023-201ENSMUST00000118217 606 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm14381-201ENSMUST00000122105 414 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm13123-201ENSMUST00000122173 492 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm8584-201ENSMUST00000171982 758 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm6621-201ENSMUST00000193251 772 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.04■□□□□ 0.32
Smarcc1P97496 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.04■□□□□ 0.32
Smarcc1P97496 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Smarcc1P97496 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Smarcc1P97496 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm24255-201ENSMUST00000104481 128 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm14350-201ENSMUST00000116642 640 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm38158-201ENSMUST00000194617 339 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcc1P97496 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.03■□□□□ 0.32
Smarcc1P97496 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC17.03■□□□□ 0.32
Smarcc1P97496 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Smarcc1P97496 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smarcc1P97496 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.02■□□□□ 0.32
Smarcc1P97496 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Gm17376-201ENSMUST00000166016 84 ntBASIC17.02■□□□□ 0.32
Smarcc1P97496 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.02■□□□□ 0.32
Smarcc1P97496 Gm3786-201ENSMUST00000202659 378 ntBASIC17.02■□□□□ 0.32
Smarcc1P97496 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Smarcc1P97496 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcc1P97496 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.02■□□□□ 0.31
Smarcc1P97496 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc1P97496 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc1P97496 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc1P97496 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.02■□□□□ 0.31
Smarcc1P97496 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcc1P97496 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Gm37489-201ENSMUST00000191883 159 ntBASIC17.01■□□□□ 0.31
Smarcc1P97496 Gm18753-201ENSMUST00000201000 566 ntBASIC17.01■□□□□ 0.31
Smarcc1P97496 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.01■□□□□ 0.31
Smarcc1P97496 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.01■□□□□ 0.31
Smarcc1P97496 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.01■□□□□ 0.31
Smarcc1P97496 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Gm44207-201ENSMUST00000204568 1424 ntBASIC17.01■□□□□ 0.31
Smarcc1P97496 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcc1P97496 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms