Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.17□□□□□ -0.46
H3f3aP84244 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.17□□□□□ -0.46
H3f3aP84244 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.17□□□□□ -0.46
H3f3aP84244 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm19078-201ENSMUST00000206311 727 ntBASIC12.17□□□□□ -0.46
H3f3aP84244 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.17□□□□□ -0.46
H3f3aP84244 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H3f3aP84244 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.16□□□□□ -0.46
H3f3aP84244 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H3f3aP84244 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H3f3aP84244 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
H3f3aP84244 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
H3f3aP84244 Gm28631-201ENSMUST00000190740 334 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Gm43094-201ENSMUST00000196549 921 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.16□□□□□ -0.46
H3f3aP84244 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.16□□□□□ -0.46
H3f3aP84244 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H3f3aP84244 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.16□□□□□ -0.46
H3f3aP84244 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H3f3aP84244 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.16□□□□□ -0.46
H3f3aP84244 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
H3f3aP84244 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
H3f3aP84244 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H3f3aP84244 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
H3f3aP84244 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H3f3aP84244 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H3f3aP84244 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm12859-201ENSMUST00000117834 427 ntBASIC12.15□□□□□ -0.46
H3f3aP84244 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.15□□□□□ -0.46
H3f3aP84244 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.15□□□□□ -0.46
H3f3aP84244 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm19220-201ENSMUST00000222682 803 ntBASIC12.15□□□□□ -0.46
H3f3aP84244 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Gm24447-201ENSMUST00000083977 338 ntBASIC12.15□□□□□ -0.46
H3f3aP84244 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
H3f3aP84244 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H3f3aP84244 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.15□□□□□ -0.46
H3f3aP84244 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
H3f3aP84244 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms