Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SgcaP82350 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.46□□□□□ -0.57
SgcaP82350 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.46□□□□□ -0.57
SgcaP82350 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.46□□□□□ -0.57
SgcaP82350 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.46□□□□□ -0.57
SgcaP82350 Gm34391-201ENSMUST00000203706 907 ntBASIC11.46□□□□□ -0.57
SgcaP82350 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SgcaP82350 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SgcaP82350 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
SgcaP82350 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SgcaP82350 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
SgcaP82350 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.45□□□□□ -0.58
SgcaP82350 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.45□□□□□ -0.58
SgcaP82350 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.45□□□□□ -0.58
SgcaP82350 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.45□□□□□ -0.58
SgcaP82350 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Rps4l-201ENSMUST00000071745 943 ntBASIC11.45□□□□□ -0.58
SgcaP82350 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
SgcaP82350 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
SgcaP82350 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Gm24589-201ENSMUST00000116692 94 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Gm7153-201ENSMUST00000117092 455 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Gm16198-201ENSMUST00000118766 670 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Gm27300-201ENSMUST00000184085 97 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Gm27335-201ENSMUST00000184758 97 ntBASIC11.44□□□□□ -0.58
SgcaP82350 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.44□□□□□ -0.58
SgcaP82350 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.44□□□□□ -0.58
SgcaP82350 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SgcaP82350 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.44□□□□□ -0.58
SgcaP82350 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms