Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.78□□□□□ -0.04
CiitaP79621 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CiitaP79621 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Gm6266-201ENSMUST00000203844 806 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Gm7561-201ENSMUST00000211203 886 ntBASIC14.78□□□□□ -0.04
CiitaP79621 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.78□□□□□ -0.04
CiitaP79621 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Gm25857-201ENSMUST00000082788 129 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.78□□□□□ -0.04
CiitaP79621 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CiitaP79621 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.78□□□□□ -0.04
CiitaP79621 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CiitaP79621 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CiitaP79621 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CiitaP79621 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CiitaP79621 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CiitaP79621 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.77□□□□□ -0.05
CiitaP79621 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.77□□□□□ -0.05
CiitaP79621 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CiitaP79621 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Gm24196-201ENSMUST00000179161 110 ntBASIC14.77□□□□□ -0.05
CiitaP79621 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CiitaP79621 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.77□□□□□ -0.05
CiitaP79621 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.77□□□□□ -0.05
CiitaP79621 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.77□□□□□ -0.05
CiitaP79621 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CiitaP79621 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CiitaP79621 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CiitaP79621 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.76□□□□□ -0.05
CiitaP79621 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gm12390-201ENSMUST00000117897 397 ntBASIC14.76□□□□□ -0.05
CiitaP79621 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.76□□□□□ -0.05
CiitaP79621 Gm27839-201ENSMUST00000184242 106 ntBASIC14.76□□□□□ -0.05
CiitaP79621 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.76□□□□□ -0.05
CiitaP79621 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.76□□□□□ -0.05
CiitaP79621 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.76□□□□□ -0.05
CiitaP79621 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gm8598-201ENSMUST00000221184 836 ntBASIC14.76□□□□□ -0.05
CiitaP79621 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CiitaP79621 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CiitaP79621 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CiitaP79621 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CiitaP79621 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms