Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.63□□□□□ -0.23
Ldb1P70662 Gm4804-201ENSMUST00000182234 999 ntBASIC13.63□□□□□ -0.23
Ldb1P70662 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.63□□□□□ -0.23
Ldb1P70662 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.63□□□□□ -0.23
Ldb1P70662 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ldb1P70662 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ldb1P70662 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.63□□□□□ -0.23
Ldb1P70662 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ldb1P70662 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ldb1P70662 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.62□□□□□ -0.23
Ldb1P70662 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 Gm9522-201ENSMUST00000182394 926 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ldb1P70662 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Ldb1P70662 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.62□□□□□ -0.23
Ldb1P70662 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ldb1P70662 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.61□□□□□ -0.23
Ldb1P70662 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.61□□□□□ -0.23
Ldb1P70662 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Ldb1P70662 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ldb1P70662 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms