Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Gm12203-201ENSMUST00000118235 598 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Gm12209-201ENSMUST00000120089 596 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Gm45880-201ENSMUST00000213041 853 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.97□□□□□ -0.17
Ybx1P62960 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ybx1P62960 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.97□□□□□ -0.17
Ybx1P62960 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ybx1P62960 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ybx1P62960 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.96□□□□□ -0.17
Ybx1P62960 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.96□□□□□ -0.17
Ybx1P62960 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Ybx1P62960 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ybx1P62960 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.96□□□□□ -0.17
Ybx1P62960 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Ybx1P62960 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.96□□□□□ -0.17
Ybx1P62960 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.96□□□□□ -0.17
Ybx1P62960 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ybx1P62960 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.96□□□□□ -0.18
Ybx1P62960 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.96□□□□□ -0.18
Ybx1P62960 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.96□□□□□ -0.18
Ybx1P62960 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ybx1P62960 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ybx1P62960 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ybx1P62960 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ybx1P62960 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ybx1P62960 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ybx1P62960 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ybx1P62960 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Gm5687-201ENSMUST00000118252 640 ntBASIC13.95□□□□□ -0.18
Ybx1P62960 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.95□□□□□ -0.18
Ybx1P62960 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ybx1P62960 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ybx1P62960 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ybx1P62960 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.95□□□□□ -0.18
Ybx1P62960 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ybx1P62960 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms