Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.73□□□□□ -0.85
Rpl39P62892 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.73□□□□□ -0.85
Rpl39P62892 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.73□□□□□ -0.85
Rpl39P62892 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.73□□□□□ -0.85
Rpl39P62892 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Rpl39P62892 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Rpl39P62892 AC158538.1-201ENSMUST00000225870 294 ntBASIC9.73□□□□□ -0.85
Rpl39P62892 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Rpl39P62892 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC9.73□□□□□ -0.85
Rpl39P62892 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rpl39P62892 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.73□□□□□ -0.85
Rpl39P62892 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rpl39P62892 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.72□□□□□ -0.85
Rpl39P62892 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Gm10327-201ENSMUST00000105222 1002 ntBASIC9.72□□□□□ -0.85
Rpl39P62892 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC9.72□□□□□ -0.85
Rpl39P62892 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Rpl39P62892 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Rpl39P62892 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Gm5069-202ENSMUST00000192714 1011 ntBASIC9.72□□□□□ -0.85
Rpl39P62892 Gm7977-201ENSMUST00000193787 748 ntBASIC9.72□□□□□ -0.85
Rpl39P62892 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
Rpl39P62892 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.72□□□□□ -0.85
Rpl39P62892 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.72□□□□□ -0.85
Rpl39P62892 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rpl39P62892 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Rpl39P62892 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.71□□□□□ -0.85
Rpl39P62892 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Rpl39P62892 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Rpl39P62892 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Rpl39P62892 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.71□□□□□ -0.85
Rpl39P62892 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rpl39P62892 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms