Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Gm15240-201ENSMUST00000118156 720 ntBASIC12.01□□□□□ -0.49
Lsm6P62313 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm6P62313 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.01□□□□□ -0.49
Lsm6P62313 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.01□□□□□ -0.49
Lsm6P62313 Gm27772-201ENSMUST00000184900 187 ntBASIC12.01□□□□□ -0.49
Lsm6P62313 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm6P62313 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.01□□□□□ -0.49
Lsm6P62313 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.01□□□□□ -0.49
Lsm6P62313 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lsm6P62313 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm6P62313 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm6P62313 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12□□□□□ -0.49
Lsm6P62313 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12□□□□□ -0.49
Lsm6P62313 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12□□□□□ -0.49
Lsm6P62313 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 AC154846.1-201ENSMUST00000226278 862 ntBASIC12□□□□□ -0.49
Lsm6P62313 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lsm6P62313 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lsm6P62313 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Lsm6P62313 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lsm6P62313 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm6P62313 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm6P62313 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.99□□□□□ -0.49
Lsm6P62313 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm6P62313 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms