Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm3P62311 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm3P62311 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.42□□□□□ -0.42
Lsm3P62311 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm3P62311 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm3P62311 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Gm23634-201ENSMUST00000175071 91 ntBASIC12.42□□□□□ -0.42
Lsm3P62311 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lsm3P62311 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.42□□□□□ -0.42
Lsm3P62311 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.42□□□□□ -0.42
Lsm3P62311 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lsm3P62311 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm3P62311 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Lsm3P62311 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.42□□□□□ -0.42
Lsm3P62311 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lsm3P62311 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Lsm3P62311 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.41□□□□□ -0.42
Lsm3P62311 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Gm6089-201ENSMUST00000197666 938 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.41□□□□□ -0.42
Lsm3P62311 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.41□□□□□ -0.42
Lsm3P62311 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lsm3P62311 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms