Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Snord83b-201ENSMUST00000104546 94 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm16379-201ENSMUST00000161469 348 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Gm3890-201ENSMUST00000182416 207 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 Gm8762-201ENSMUST00000193486 339 ntBASIC18.32■□□□□ 0.52
Nphp4P59240 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC18.32■□□□□ 0.52
Nphp4P59240 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nphp4P59240 Gm8793-201ENSMUST00000183069 1303 ntBASIC18.31■□□□□ 0.52
Nphp4P59240 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nphp4P59240 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nphp4P59240 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.31■□□□□ 0.52
Nphp4P59240 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC18.31■□□□□ 0.52
Nphp4P59240 Gm7809-201ENSMUST00000153199 742 ntBASIC18.31■□□□□ 0.52
Nphp4P59240 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC18.31■□□□□ 0.52
Nphp4P59240 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC18.31■□□□□ 0.52
Nphp4P59240 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nphp4P59240 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC18.31■□□□□ 0.52
Nphp4P59240 Olfr284-202ENSMUST00000206647 966 ntBASIC18.31■□□□□ 0.52
Nphp4P59240 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.31■□□□□ 0.52
Nphp4P59240 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nphp4P59240 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nphp4P59240 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nphp4P59240 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Nphp4P59240 Gm13786-201ENSMUST00000122371 333 ntBASIC18.3■□□□□ 0.52
Nphp4P59240 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC18.3■□□□□ 0.52
Nphp4P59240 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC18.3■□□□□ 0.52
Nphp4P59240 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC18.3■□□□□ 0.52
Nphp4P59240 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC18.3■□□□□ 0.52
Nphp4P59240 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nphp4P59240 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.3■□□□□ 0.52
Nphp4P59240 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nphp4P59240 Gm14752-201ENSMUST00000120719 2075 ntBASIC18.3■□□□□ 0.52
Nphp4P59240 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nphp4P59240 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.29■□□□□ 0.52
Nphp4P59240 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nphp4P59240 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC18.29■□□□□ 0.52
Nphp4P59240 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.29■□□□□ 0.52
Nphp4P59240 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Nphp4P59240 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Nphp4P59240 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nphp4P59240 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC18.29■□□□□ 0.52
Nphp4P59240 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nphp4P59240 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nphp4P59240 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nphp4P59240 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms