Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Gm12859-201ENSMUST00000117834 427 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Nup43P59235 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Gm28631-201ENSMUST00000190740 334 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.91□□□□□ -0.34
Nup43P59235 Gm19220-201ENSMUST00000222682 803 ntBASIC12.91□□□□□ -0.34
Nup43P59235 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup43P59235 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup43P59235 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.9□□□□□ -0.34
Nup43P59235 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.9□□□□□ -0.34
Nup43P59235 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup43P59235 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Gm15770-201ENSMUST00000117498 584 ntBASIC12.9□□□□□ -0.34
Nup43P59235 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup43P59235 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.9□□□□□ -0.34
Nup43P59235 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.9□□□□□ -0.34
Nup43P59235 Gm43094-201ENSMUST00000196549 921 ntBASIC12.9□□□□□ -0.34
Nup43P59235 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.9□□□□□ -0.34
Nup43P59235 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup43P59235 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nup43P59235 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.9□□□□□ -0.35
Nup43P59235 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.89□□□□□ -0.35
Nup43P59235 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup43P59235 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nup43P59235 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nup43P59235 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.89□□□□□ -0.35
Nup43P59235 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.89□□□□□ -0.35
Nup43P59235 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.89□□□□□ -0.35
Nup43P59235 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.89□□□□□ -0.35
Nup43P59235 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.89□□□□□ -0.35
Nup43P59235 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup43P59235 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms