Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tpm1P58771 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.23■□□□□ 0.03
Tpm1P58771 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.23■□□□□ 0.03
Tpm1P58771 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.23■□□□□ 0.03
Tpm1P58771 AA543401-201ENSMUST00000164248 1269 ntBASIC15.23■□□□□ 0.03
Tpm1P58771 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.23■□□□□ 0.03
Tpm1P58771 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.23■□□□□ 0.03
Tpm1P58771 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.23■□□□□ 0.03
Tpm1P58771 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tpm1P58771 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tpm1P58771 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Tpm1P58771 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.22■□□□□ 0.03
Tpm1P58771 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Tpm1P58771 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tpm1P58771 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tpm1P58771 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.22■□□□□ 0.03
Tpm1P58771 Gm15427-201ENSMUST00000117288 531 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.22■□□□□ 0.03
Tpm1P58771 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Gm44492-201ENSMUST00000197012 141 ntBASIC15.22■□□□□ 0.03
Tpm1P58771 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tpm1P58771 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Tpm1P58771 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tpm1P58771 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.21■□□□□ 0.03
Tpm1P58771 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.21■□□□□ 0.03
Tpm1P58771 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.21■□□□□ 0.03
Tpm1P58771 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Gm44719-201ENSMUST00000206404 149 ntBASIC15.21■□□□□ 0.03
Tpm1P58771 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.21■□□□□ 0.03
Tpm1P58771 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.21■□□□□ 0.03
Tpm1P58771 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tpm1P58771 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tpm1P58771 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm1P58771 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm1P58771 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm1P58771 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tpm1P58771 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms