Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sssca1P56873 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Sssca1P56873 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sssca1P56873 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sssca1P56873 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Sssca1P56873 Gm1401-201ENSMUST00000122048 772 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Gm12260-201ENSMUST00000122447 411 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.04□□□□□ -0.64
Sssca1P56873 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sssca1P56873 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.04□□□□□ -0.64
Sssca1P56873 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sssca1P56873 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sssca1P56873 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.03□□□□□ -0.64
Sssca1P56873 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.03□□□□□ -0.64
Sssca1P56873 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.03□□□□□ -0.64
Sssca1P56873 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.03□□□□□ -0.64
Sssca1P56873 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.03□□□□□ -0.64
Sssca1P56873 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.03□□□□□ -0.64
Sssca1P56873 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.03□□□□□ -0.64
Sssca1P56873 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sssca1P56873 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sssca1P56873 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Sssca1P56873 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Sssca1P56873 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sssca1P56873 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sssca1P56873 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sssca1P56873 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sssca1P56873 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.02□□□□□ -0.64
Sssca1P56873 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sssca1P56873 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sssca1P56873 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sssca1P56873 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms