Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.25□□□□□ -0.45
Abcd3P55096 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.25□□□□□ -0.45
Abcd3P55096 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.25□□□□□ -0.45
Abcd3P55096 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.25□□□□□ -0.45
Abcd3P55096 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Abcd3P55096 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Gm15240-201ENSMUST00000118156 720 ntBASIC12.24□□□□□ -0.45
Abcd3P55096 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.24□□□□□ -0.45
Abcd3P55096 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.24□□□□□ -0.45
Abcd3P55096 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.24□□□□□ -0.45
Abcd3P55096 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.24□□□□□ -0.45
Abcd3P55096 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.24□□□□□ -0.45
Abcd3P55096 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.24□□□□□ -0.45
Abcd3P55096 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Abcd3P55096 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Abcd3P55096 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Abcd3P55096 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.23□□□□□ -0.45
Abcd3P55096 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Abcd3P55096 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.23□□□□□ -0.45
Abcd3P55096 Mir6956-201ENSMUST00000183598 62 ntBASIC12.23□□□□□ -0.45
Abcd3P55096 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.23□□□□□ -0.45
Abcd3P55096 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.23□□□□□ -0.45
Abcd3P55096 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.23□□□□□ -0.45
Abcd3P55096 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Abcd3P55096 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Abcd3P55096 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.23□□□□□ -0.45
Abcd3P55096 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms