Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh6P54276 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msh6P54276 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh6P54276 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh6P54276 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.19■□□□□ 0.34
Msh6P54276 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh6P54276 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Msh6P54276 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Mir686-201ENSMUST00000102174 109 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm22323-201ENSMUST00000103832 109 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.18■□□□□ 0.34
Msh6P54276 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.18■□□□□ 0.34
Msh6P54276 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC17.18■□□□□ 0.34
Msh6P54276 Gm25261-201ENSMUST00000157416 134 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm26083-201ENSMUST00000157904 193 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC17.18■□□□□ 0.34
Msh6P54276 Gm25927-201ENSMUST00000175058 117 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm29199-201ENSMUST00000187766 775 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm37922-201ENSMUST00000195596 455 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm44364-201ENSMUST00000198368 141 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Msh6P54276 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Gm18935-201ENSMUST00000212692 664 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Msh6P54276 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC17.18■□□□□ 0.34
Msh6P54276 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Msh6P54276 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Msh6P54276 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.18■□□□□ 0.34
Msh6P54276 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Msh6P54276 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh6P54276 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Msh6P54276 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.17■□□□□ 0.34
Msh6P54276 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Gm15808-201ENSMUST00000119046 604 ntBASIC17.17■□□□□ 0.34
Msh6P54276 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.17■□□□□ 0.34
Msh6P54276 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Gm38144-201ENSMUST00000192790 465 ntBASIC17.17■□□□□ 0.34
Msh6P54276 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.17■□□□□ 0.34
Msh6P54276 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.17■□□□□ 0.34
Msh6P54276 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Msh6P54276 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.17■□□□□ 0.34
Msh6P54276 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Msh6P54276 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Msh6P54276 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh6P54276 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC17.16■□□□□ 0.34
Msh6P54276 Gm13369-201ENSMUST00000119442 987 ntBASIC17.16■□□□□ 0.34
Msh6P54276 Gm13786-201ENSMUST00000122371 333 ntBASIC17.16■□□□□ 0.34
Msh6P54276 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.16■□□□□ 0.34
Msh6P54276 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.16■□□□□ 0.34
Msh6P54276 Gm37466-201ENSMUST00000195692 652 ntBASIC17.16■□□□□ 0.34
Msh6P54276 Gm45865-201ENSMUST00000211815 945 ntBASIC17.16■□□□□ 0.34
Msh6P54276 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.16■□□□□ 0.34
Msh6P54276 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Msh6P54276 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms