Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.69□□□□□ -0.22
Fdft1P53798 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Fdft1P53798 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.69□□□□□ -0.22
Fdft1P53798 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.69□□□□□ -0.22
Fdft1P53798 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.69□□□□□ -0.22
Fdft1P53798 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Fdft1P53798 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.68□□□□□ -0.22
Fdft1P53798 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.68□□□□□ -0.22
Fdft1P53798 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Fdft1P53798 Gm13616-201ENSMUST00000120600 222 ntBASIC13.68□□□□□ -0.22
Fdft1P53798 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Fdft1P53798 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.68□□□□□ -0.22
Fdft1P53798 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.68□□□□□ -0.22
Fdft1P53798 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Fdft1P53798 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Fdft1P53798 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Fdft1P53798 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Fdft1P53798 Gm15460-201ENSMUST00000118147 391 ntBASIC13.67□□□□□ -0.22
Fdft1P53798 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.67□□□□□ -0.22
Fdft1P53798 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Fdft1P53798 Gm29741-201ENSMUST00000192667 421 ntBASIC13.67□□□□□ -0.22
Fdft1P53798 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.67□□□□□ -0.22
Fdft1P53798 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.67□□□□□ -0.22
Fdft1P53798 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.67□□□□□ -0.22
Fdft1P53798 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Fdft1P53798 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Fdft1P53798 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Fdft1P53798 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Fdft1P53798 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Fdft1P53798 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms