Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.9□□□□□ -0.18
Sox1P53783 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sox1P53783 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sox1P53783 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Sox1P53783 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox1P53783 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.89□□□□□ -0.19
Sox1P53783 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.89□□□□□ -0.19
Sox1P53783 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Gm23699-201ENSMUST00000158835 135 ntBASIC13.89□□□□□ -0.19
Sox1P53783 Gm25951-201ENSMUST00000175330 64 ntBASIC13.89□□□□□ -0.19
Sox1P53783 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.89□□□□□ -0.19
Sox1P53783 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sox1P53783 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sox1P53783 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.89□□□□□ -0.19
Sox1P53783 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.88□□□□□ -0.19
Sox1P53783 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox1P53783 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sox1P53783 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Gm11667-201ENSMUST00000119828 486 ntBASIC13.88□□□□□ -0.19
Sox1P53783 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Sox1P53783 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.88□□□□□ -0.19
Sox1P53783 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Sox1P53783 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.88□□□□□ -0.19
Sox1P53783 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Gm8285-201ENSMUST00000208293 759 ntBASIC13.88□□□□□ -0.19
Sox1P53783 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.88□□□□□ -0.19
Sox1P53783 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Sox1P53783 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sox1P53783 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.88□□□□□ -0.19
Sox1P53783 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sox1P53783 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sox1P53783 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox1P53783 Gm24548-201ENSMUST00000158650 108 ntBASIC13.87□□□□□ -0.19
Sox1P53783 Gm26956-201ENSMUST00000182176 986 ntBASIC13.87□□□□□ -0.19
Sox1P53783 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.87□□□□□ -0.19
Sox1P53783 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.87□□□□□ -0.19
Sox1P53783 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Sox1P53783 Gm8385-201ENSMUST00000058999 643 ntBASIC13.87□□□□□ -0.19
Sox1P53783 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.87□□□□□ -0.19
Sox1P53783 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sox1P53783 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Sox1P53783 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms