Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccr4P51680 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccr4P51680 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccr4P51680 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Gm27618-201ENSMUST00000183671 60 ntBASIC12.67□□□□□ -0.38
Ccr4P51680 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccr4P51680 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.67□□□□□ -0.38
Ccr4P51680 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccr4P51680 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccr4P51680 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccr4P51680 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccr4P51680 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccr4P51680 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.66□□□□□ -0.38
Ccr4P51680 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ccr4P51680 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccr4P51680 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Gm15393-201ENSMUST00000120499 219 ntBASIC12.66□□□□□ -0.38
Ccr4P51680 Gm14767-201ENSMUST00000121559 586 ntBASIC12.66□□□□□ -0.38
Ccr4P51680 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccr4P51680 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccr4P51680 Gm21470-201ENSMUST00000187680 696 ntBASIC12.66□□□□□ -0.38
Ccr4P51680 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ccr4P51680 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccr4P51680 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.66□□□□□ -0.38
Ccr4P51680 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccr4P51680 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccr4P51680 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Mir497b-201ENSMUST00000093601 125 ntBASIC12.65□□□□□ -0.38
Ccr4P51680 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccr4P51680 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccr4P51680 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccr4P51680 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Ccr4P51680 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ccr4P51680 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr4P51680 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccr4P51680 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr4P51680 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccr4P51680 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccr4P51680 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms