Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14□□□□□ -0.17
SftpbP50405 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SftpbP50405 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SftpbP50405 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.99□□□□□ -0.17
SftpbP50405 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Gm24158-201ENSMUST00000175263 71 ntBASIC13.99□□□□□ -0.17
SftpbP50405 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.99□□□□□ -0.17
SftpbP50405 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.99□□□□□ -0.17
SftpbP50405 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.99□□□□□ -0.17
SftpbP50405 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.99□□□□□ -0.17
SftpbP50405 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
SftpbP50405 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SftpbP50405 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
SftpbP50405 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SftpbP50405 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SftpbP50405 Gm14822-201ENSMUST00000122247 291 ntBASIC13.98□□□□□ -0.17
SftpbP50405 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.98□□□□□ -0.17
SftpbP50405 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.98□□□□□ -0.17
SftpbP50405 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.98□□□□□ -0.17
SftpbP50405 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.98□□□□□ -0.17
SftpbP50405 Gm16476-201ENSMUST00000221544 139 ntBASIC13.98□□□□□ -0.17
SftpbP50405 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SftpbP50405 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Mir497b-201ENSMUST00000093601 125 ntBASIC13.98□□□□□ -0.17
SftpbP50405 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SftpbP50405 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SftpbP50405 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SftpbP50405 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SftpbP50405 Gm22065-201ENSMUST00000103753 110 ntBASIC13.97□□□□□ -0.17
SftpbP50405 Gm22066-201ENSMUST00000103761 110 ntBASIC13.97□□□□□ -0.17
SftpbP50405 Gm24932-201ENSMUST00000103763 110 ntBASIC13.97□□□□□ -0.17
SftpbP50405 Gm24115-201ENSMUST00000103799 110 ntBASIC13.97□□□□□ -0.17
SftpbP50405 Gm22190-201ENSMUST00000103827 110 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms