Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC8.82□□□□□ -1
Xcl1P47993 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Gm40377-201ENSMUST00000204604 2015 ntBASIC8.82□□□□□ -1
Xcl1P47993 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Gm16061-201ENSMUST00000122167 857 ntBASIC8.82□□□□□ -1
Xcl1P47993 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC8.82□□□□□ -1
Xcl1P47993 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC8.82□□□□□ -1
Xcl1P47993 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Gm4217-201ENSMUST00000182243 1002 ntBASIC8.82□□□□□ -1
Xcl1P47993 Gm8349-201ENSMUST00000182720 1003 ntBASIC8.82□□□□□ -1
Xcl1P47993 Gm27275-201ENSMUST00000184318 272 ntBASIC8.82□□□□□ -1
Xcl1P47993 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Gm18636-201ENSMUST00000218846 1066 ntBASIC8.82□□□□□ -1
Xcl1P47993 AC130713.1-201ENSMUST00000228853 1096 ntBASIC8.82□□□□□ -1
Xcl1P47993 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Xcl1P47993 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC8.82□□□□□ -1
Xcl1P47993 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Xcl1P47993 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC8.82□□□□□ -1
Xcl1P47993 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Xcl1P47993 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC8.82□□□□□ -1
Xcl1P47993 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Gm11453-201ENSMUST00000117318 1007 ntBASIC8.81□□□□□ -1
Xcl1P47993 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC8.81□□□□□ -1
Xcl1P47993 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Gm16042-201ENSMUST00000204813 1247 ntBASIC8.81□□□□□ -1
Xcl1P47993 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC8.81□□□□□ -1
Xcl1P47993 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 AC126549.2-201ENSMUST00000223997 1976 ntBASIC8.81□□□□□ -1
Xcl1P47993 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Xcl1P47993 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Xcl1P47993 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms