Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HttP42859 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HttP42859 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HttP42859 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HttP42859 Gm12015-201ENSMUST00000117065 843 ntBASIC14.18□□□□□ -0.14
HttP42859 Gm12899-201ENSMUST00000120565 551 ntBASIC14.18□□□□□ -0.14
HttP42859 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.18□□□□□ -0.14
HttP42859 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gm19287-201ENSMUST00000203190 358 ntBASIC14.18□□□□□ -0.14
HttP42859 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HttP42859 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HttP42859 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.18□□□□□ -0.14
HttP42859 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HttP42859 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.17□□□□□ -0.14
HttP42859 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.17□□□□□ -0.14
HttP42859 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.17□□□□□ -0.14
HttP42859 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.17□□□□□ -0.14
HttP42859 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.17□□□□□ -0.14
HttP42859 Gm12266-201ENSMUST00000120311 962 ntBASIC14.17□□□□□ -0.14
HttP42859 Gm11450-201ENSMUST00000121144 333 ntBASIC14.17□□□□□ -0.14
HttP42859 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
HttP42859 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.17□□□□□ -0.14
HttP42859 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.17□□□□□ -0.14
HttP42859 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HttP42859 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm8325-201ENSMUST00000099086 453 ntBASIC14.17□□□□□ -0.14
HttP42859 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.17□□□□□ -0.14
HttP42859 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HttP42859 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Gm12058-201ENSMUST00000118614 437 ntBASIC14.17□□□□□ -0.14
HttP42859 Gm17812-201ENSMUST00000204935 318 ntBASIC14.17□□□□□ -0.14
HttP42859 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HttP42859 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HttP42859 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Gm9463-201ENSMUST00000206707 601 ntBASIC14.16□□□□□ -0.14
HttP42859 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HttP42859 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HttP42859 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.16□□□□□ -0.14
HttP42859 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Gm23153-201ENSMUST00000175323 313 ntBASIC14.16□□□□□ -0.14
HttP42859 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.16□□□□□ -0.14
HttP42859 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HttP42859 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HttP42859 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HttP42859 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.15□□□□□ -0.14
HttP42859 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms