Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox6P40645 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Sox6P40645 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sox6P40645 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox6P40645 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Gm8410-201ENSMUST00000117225 605 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox6P40645 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Sox6P40645 Gm29310-201ENSMUST00000185468 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21825-201ENSMUST00000185728 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm29109-201ENSMUST00000185895 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21896-201ENSMUST00000186520 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21873-201ENSMUST00000186728 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21794-201ENSMUST00000187056 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21880-201ENSMUST00000187275 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21826-201ENSMUST00000187451 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21198-201ENSMUST00000188393 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21749-201ENSMUST00000189343 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21901-201ENSMUST00000189568 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm29424-201ENSMUST00000189716 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm28599-201ENSMUST00000189838 694 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21867-201ENSMUST00000189917 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm29269-201ENSMUST00000190087 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21722-201ENSMUST00000190153 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm28423-201ENSMUST00000190701 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21899-201ENSMUST00000190745 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21910-201ENSMUST00000191163 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21849-201ENSMUST00000191571 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm28678-201ENSMUST00000191593 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm20910-201ENSMUST00000193268 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Gm21871-201ENSMUST00000194621 696 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.85□□□□□ -0.35
Sox6P40645 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.85□□□□□ -0.35
Sox6P40645 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.85□□□□□ -0.35
Sox6P40645 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sox6P40645 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sox6P40645 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sox6P40645 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.84□□□□□ -0.35
Sox6P40645 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Sox6P40645 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox6P40645 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox6P40645 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox6P40645 Gm6222-201ENSMUST00000120787 396 ntBASIC12.84□□□□□ -0.35
Sox6P40645 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Gm25948-201ENSMUST00000175334 112 ntBASIC12.84□□□□□ -0.35
Sox6P40645 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.84□□□□□ -0.35
Sox6P40645 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox6P40645 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox6P40645 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms