Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.77□□□□□ -0.53
Slc6a1P31648 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.77□□□□□ -0.53
Slc6a1P31648 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Slc6a1P31648 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Slc6a1P31648 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm7229-201ENSMUST00000214719 1007 ntBASIC11.76□□□□□ -0.53
Slc6a1P31648 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.76□□□□□ -0.53
Slc6a1P31648 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Slc6a1P31648 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc6a1P31648 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.75□□□□□ -0.53
Slc6a1P31648 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.75□□□□□ -0.53
Slc6a1P31648 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc6a1P31648 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc6a1P31648 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms