Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm22042-201ENSMUST00000082989 165 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Gm26232-201ENSMUST00000083360 166 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Gm24136-201ENSMUST00000083374 165 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Gm26110-201ENSMUST00000083971 165 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PdgfbP31240 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.61□□□□□ -0.23
PdgfbP31240 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PdgfbP31240 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.61□□□□□ -0.23
PdgfbP31240 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PdgfbP31240 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.61□□□□□ -0.23
PdgfbP31240 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
PdgfbP31240 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.61□□□□□ -0.23
PdgfbP31240 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PdgfbP31240 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 Gm11222-201ENSMUST00000119005 738 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Gm14017-201ENSMUST00000121934 386 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.6□□□□□ -0.23
PdgfbP31240 Gm37986-201ENSMUST00000193285 383 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.6□□□□□ -0.23
PdgfbP31240 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.6□□□□□ -0.23
PdgfbP31240 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PdgfbP31240 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PdgfbP31240 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.59□□□□□ -0.23
PdgfbP31240 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
PdgfbP31240 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PdgfbP31240 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC13.59□□□□□ -0.23
PdgfbP31240 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm2260-201ENSMUST00000184965 657 ntBASIC13.59□□□□□ -0.23
PdgfbP31240 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.59□□□□□ -0.23
PdgfbP31240 Gm19163-201ENSMUST00000223313 780 ntBASIC13.59□□□□□ -0.23
PdgfbP31240 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PdgfbP31240 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PdgfbP31240 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms