Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Nedd8P29595 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nedd8P29595 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.59□□□□□ -0.39
Nedd8P29595 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nedd8P29595 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.59□□□□□ -0.39
Nedd8P29595 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Nedd8P29595 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.59□□□□□ -0.39
Nedd8P29595 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.59□□□□□ -0.39
Nedd8P29595 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.59□□□□□ -0.39
Nedd8P29595 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nedd8P29595 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nedd8P29595 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nedd8P29595 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Nedd8P29595 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nedd8P29595 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.58□□□□□ -0.4
Nedd8P29595 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.58□□□□□ -0.4
Nedd8P29595 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Nedd8P29595 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.58□□□□□ -0.4
Nedd8P29595 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Nedd8P29595 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.58□□□□□ -0.4
Nedd8P29595 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nedd8P29595 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.57□□□□□ -0.4
Nedd8P29595 Gm13418-201ENSMUST00000119097 944 ntBASIC12.57□□□□□ -0.4
Nedd8P29595 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nedd8P29595 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms