Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Gm16372-201ENSMUST00000073088 450 ntBASIC15.63■□□□□ 0.09
Vcam1P29533 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Vcam1P29533 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Vcam1P29533 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Mir686-201ENSMUST00000102174 109 ntBASIC15.62■□□□□ 0.09
Vcam1P29533 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Vcam1P29533 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.62■□□□□ 0.09
Vcam1P29533 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.62■□□□□ 0.09
Vcam1P29533 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.62■□□□□ 0.09
Vcam1P29533 Gm43179-201ENSMUST00000198797 275 ntBASIC15.62■□□□□ 0.09
Vcam1P29533 Gm43118-201ENSMUST00000199149 775 ntBASIC15.62■□□□□ 0.09
Vcam1P29533 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Vcam1P29533 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.62■□□□□ 0.09
Vcam1P29533 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.62■□□□□ 0.09
Vcam1P29533 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.61■□□□□ 0.09
Vcam1P29533 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Vcam1P29533 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.61■□□□□ 0.09
Vcam1P29533 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.61■□□□□ 0.09
Vcam1P29533 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcam1P29533 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcam1P29533 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.61■□□□□ 0.09
Vcam1P29533 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.61■□□□□ 0.09
Vcam1P29533 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcam1P29533 Gm6013-201ENSMUST00000212264 699 ntBASIC15.61■□□□□ 0.09
Vcam1P29533 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.61■□□□□ 0.09
Vcam1P29533 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.61■□□□□ 0.09
Vcam1P29533 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vcam1P29533 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.6■□□□□ 0.09
Vcam1P29533 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.6■□□□□ 0.09
Vcam1P29533 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vcam1P29533 Gm37008-201ENSMUST00000195712 319 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms